Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891302.1_cds_XP_016446071.1_40965
CDS Infomation

[gene=LOC107771243] [db_xref=GeneID:107771243] [protein=probable serine/threonine-protein kinase At1g09600] [protein_id=XP_016446071.1] [location=join(2484..2945,3083..3367,6380..6697,7555..7782,8140..8240,8832..8946,9044..9496,9775..9981)] [gbkey=CDS]
Sequence

ATGGGCTGTGTTTGCTCAAAGGGGGTTTCTATTAAAAGGCATGGCAAGAATCGAACTAAG
GATAAAGAAAAAAAGAAATCTTCTTCCGAAAGGCTTATTGCATCAACCAAGGAGGATGTT
TTAGTGGAGGTTGATAATGGTGGCATTGATGCGAGGACGAGGCTTATATCAACAGAGCCA
ATTGAGAAAAGTGCAGGTTCCACCCCACCAGCTTGGGATGAGGGAGAGAAGAAGCCTATA
GTTTTTGAGAAACCTGAAGTGCCACAGGTGCAAAGACGGGCAGCAACAGATGCCGCTGAG
GTTGGAGGACAACCTCAGATCAATAGAATATTCAGTGTTAGGAATGGAGTTGACGGTGCA
CAAGTCGTTGCTGGATGGCCATCATGGTTGACAACTGTGGCAGGTGAAGCTATTAAAGGC
TGGGTTCCTCGGAAGGCAGATTCATTTGAGAAGCTGGATAAGATTGGCCAAGGTACATAC
AGCAGTGTATATCGAGCCCGAGACCTGGAAACTGGAAAGATTGTTGCATTGAAGAAAGTA
CGATTTATCAACATGGATCCAGAAAGTGTTCGCTTTATGGCTAGGGAAATTTTAATACTT
CGCAGGCTAGATCATCCAAATGTTATGAAGCTTGAAAGTCTTGTGACCTCTCGCGTCTCA
GGCAATCTGTATCTTGTCTTTGAATACATGGAACATGACCTTGCAGGTCTTGCGGCATCA
CCAACTGTCAAATTTACTGAATCTCAGATTAAATGTTACATGCGGCAGCTGCTTCGTGGA
CTTGAACACTGCCATAGTCGTGGTGTCCTGCACCGAGATATTAAGGGTTCGAATCTTCTG
ATTGACAATAATGGGAACCTCAAGATTGGCGATTTTGGGCTTGCAACTTTATATCAAAAC
AATCAAAGGCAGCCTCTAACAAGTCGTGTAGTTACTTTGTGGTATCGACCTCCTGAACTT
TTGCTTGGTGCTACAGATTATGGAGTGGCTGTAGATTTGTGGAGTTCTGGTTGCATCCTT
GCTGAATTGTTTGCAGGGAAGCCTATAATGCCAGGAAGAACTGAGGTGGAACAGCTGCAT
AAGATCTTTAAACTTTGCGGTTCACCATCCGAAGAATACTGGAAGAAATCAAAATTGCCA
CATGCAACGATCTTTAAACCTCAACAGCCATATAAGCGCTGCCTTGCCAACACGTTCAAG
GACTTCCCTGTATCAGCTTTAGCACTTTTGGATTCTCTCCTGGCTTTTGAACCTGAGTAT
CGGGGTTCTGCTACTTTGGCACTTCAAAGTGAGTTCTTCACAACGAAGCCTCTTCCTTGT
GATCCGTCATCTTTACCCAAGTATCCTCCAAGCAAGGAATTTGACGCTAAGATGAGAGAA
GAGGAAGCAAGAAGGCAGCGAGGAGGAGGTATCAAAGGATCTGGTGTTGAATCTAATAGA
AAGGGCGCAAAACAGTCAAAAGCAGTACCAGCGCCTGATGCTAATGCTGAGTTACCAGCA
TCCATACAGAAGTGGAAACAGCTGTCAAATCCCACAAGCATTAGTGAGAAGTACAGTCGT
GAAGAGGATGGCGGTTCTGGTTTCCCTATTGATCCCAGCAGAGGATCTCTATATAACGGC
CATTCATCACAAGTCAGTGATTCTGGAAATTCCATAAACACAAATATTAATGGACTTGGC
CCTCTTATGAGTTCTCAACGAGGATTTGATTCTTCAAGATTCGGAGAATTAAGTGCACGT
GGGTCCTTCAGACCTCACGGTGCAGCAGCTCAATTGTCCAGGTTCTCCAATTCAGTTGCA
GCTCATGGTAGTTCAAGATTTGATATGAGCAGGGATTCACAGTGGCCTGAAGAGCACATG
ACTGGAAAGTATAACCAGCTTAATGATTCTTCCTACTCTCTTTTGGGGAAAGACTCTTCC
AGTAAGAAGGACAAGCATTCAACAGGAAAGGAGTCTACAGCGGGTTATATTCCCAAGAAG
AATCGAATCCACTACTCTGGACCATTGATGCCACCCGGTGGAAACATTGACGAAATGCTC
AAAGAGCATGAGAAACAGATACAGCAAGCTGTCCGGAAAGCTCGTCTTGACAAAAATAAG
ATGAAAAAGGAACACAATGGCAATGGGCAAACAGAATCGCTCTTACACTATACAAGCAAT
GGTCGGTGA

Peptide Sequence

PEP ID

XP_016446071.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g09600 [Nicotiana tabacum]
Sequence

MGCVCSKGVSIKRHGKNRTKDKEKKKSSSERLIASTKEDVLVEVDNGGIDARTRLISTEP
IEKSAGSTPPAWDEGEKKPIVFEKPEVPQVQRRAATDAAEVGGQPQINRIFSVRNGVDGA
QVVAGWPSWLTTVAGEAIKGWVPRKADSFEKLDKIGQGTYSSVYRARDLETGKIVALKKV
RFINMDPESVRFMAREILILRRLDHPNVMKLESLVTSRVSGNLYLVFEYMEHDLAGLAAS
PTVKFTESQIKCYMRQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATLYQN
NQRQPLTSRVVTLWYRPPELLLGATDYGVAVDLWSSGCILAELFAGKPIMPGRTEVEQLH
KIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKRCLANTFKDFPVSALALLDSLLAFEPEY
RGSATLALQSEFFTTKPLPCDPSSLPKYPPSKEFDAKMREEEARRQRGGGIKGSGVESNR
KGAKQSKAVPAPDANAELPASIQKWKQLSNPTSISEKYSREEDGGSGFPIDPSRGSLYNG
HSSQVSDSGNSINTNINGLGPLMSSQRGFDSSRFGELSARGSFRPHGAAAQLSRFSNSVA
AHGSSRFDMSRDSQWPEEHMTGKYNQLNDSSYSLLGKDSSSKKDKHSTGKESTAGYIPKK
NRIHYSGPLMPPGGNIDEMLKEHEKQIQQAVRKARLDKNKMKKEHNGNGQTESLLHYTSN
GR

Transcript Sequence

Gene sequence data has not been registered.